Bioinformatics approaches for functional annotation of membrane proteins
نویسندگان
چکیده
منابع مشابه
Functional Annotation of Two Hypothetical Proteins Reveals Valuable Proteins Involved in Response to Salinity: An in silico Approach
Through the exponential development in the specification of sequences and structures of proteins by genome sequencing and structural genomics approaches, there is a growing demand for valid bioinformatics methods to define these proteins function. In this study, our objective is to identify the function of unknown proteins from UCB-1 pistachio rootstock and specify their class...
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Chloroflexus aurantiacus J-10-f1 is an anoxygenic, photosynthetic, facultative autotrophic gram negative bacterium found from hot spring at a temperature range of 50-60°C. It can sustain itself in dark only if oxygen is available thereby exhibiting a dark orange color, however display a dark green color when grown in sunlight. Genome of the organism contains total of 3853 proteins out ...
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Membrane-binding peripheral proteins play important roles in many biological processes, including cell signaling and membrane trafficking. Unlike integral membrane proteins, these proteins bind the membrane mostly in a reversible manner. Since peripheral proteins do not have canonical transmembrane segments, it is difficult to identify them from their amino acid sequences. As a first step towar...
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High throughput sequencing must be matched by high throughput annotation. Given the large number of annotation tools available, a multitude of interdependent analyses are required for an in-depth annotation of even a single BAC sequence. Special annotation pipeline software is required to make such annotation processes feasible in an automated fashion. In terms of functionality, such software s...
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ژورنال
عنوان ژورنال: Briefings in Bioinformatics
سال: 2013
ISSN: 1467-5463,1477-4054
DOI: 10.1093/bib/bbt015